PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050930.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 161aa    MW: 18650 Da    PI: 7.0419
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050930.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.43.1e-1957144194
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k++++s+v++  +l lp +f+++h  ++ ++ +++lede+g +++  +   +++ +  l++GW++F   ++L++gD++vF+l + ++f+++
  TRIDC1BG050930.7  57 FVKTMVRSHVSSCFWLGLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRFKCY 143
                       99*********************9994.44.4459***************..555444..***********************9887988877 PP

                       E CS
                B3  94 v 94 
                       v
  TRIDC1BG050930.7 144 V 144
                       6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
YKIFPELDDF VRRRRVSKSV DNGRGYTGRI SSYQQQQRAF KRAEKLQDSL DPDNPSFVKT  60
MVRSHVSSCF WLGLPSSFCK DHLPPREHKM VLEDEEGVEF DAVYIGNRTG LSGGWRGFSM  120
HHDLEDGDSL VFELAEPDRF KCYVLPSFSL YKATSYFVSY L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.18e-41B3 family protein