PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050930.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 101aa    MW: 11572.1 Da    PI: 5.0932
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050930.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.88.3e-18184594
                      -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3  5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                      +++s+v++  +l lp +f+++h  ++ ++ +++lede+g +++  +   +++ +  l++GW++F   ++L++gD++vF+l + ++f+++v
  TRIDC1BG050930.8  1 MVRSHVSSCFWLGLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRFKCYV 84
                      57899**************9994.44.4459***************..555444..***********************98879998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MVRSHVSSCF WLGLPSSFCK DHLPPREHKM VLEDEEGVEF DAVYIGNRTG LSGGWRGFSM  60
HHDLEDGDSL VFELAEPDRF KCYVLPSFSL YKATSYFVSY L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.19e-31B3 family protein