PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG051140.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 453aa    MW: 47308.9 Da    PI: 6.5631
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG051140.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS285.71.3e-87784442374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       + lL+ecA a+s g+l+ a+ +L +ls++asp++ +  +Rl+ayf++A+aarl++s+ ++++ ++ps++s  + s + aa+++f++v P+ + 
  TRIDC1BG051140.2  78 IALLMECAVAMSVGNLADANGTLLELSQMASPYApSCGERLVAYFARAMAARLMSSWVGVCAPVHPSSAS--SWSGVHAAFRAFHNVAPFARC 168
                       689*******************************8889***********************999888887..477777899************ PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqG..lQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       ++l++NqaIlea+ g++ vH++D+d+  G  lQW++Ll aLa+Rp+gpp lR+Tg+g     s+ +l+  g +La +A++lg+pfef +++ +
  TRIDC1BG051140.2 169 AYLACNQAILEAFRGKRLVHVVDLDVVPGgaLQWLSLLSALAARPGGPPVLRVTGFGV----SASALHDAGTQLAGLATKLGMPFEFYAVAKR 257
                       **************************988447**************************....9**************************6444 PP

              GRAS 185 rledl.eleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe...adhnsesFlerflealeyysalfdsle 272
                         + +  + +L  ++ gE++aV++    h l+d  ++       +++lv+ l+Pkvv++veqe   a  ++++Fl+rf+ al++ysa+fd+l 
  TRIDC1BG051140.2 258 PGDVVdAVADLPSRRpGEVVAVHWLR--HALYDAAGDDVV----TMRLVRWLEPKVVTLVEQErgpAGGDGGQFLDRFVAALHHYSAVFDALG 344
                       5555556889977767********98..888877777766....9******************766666889********************6 PP

              GRAS 273 aklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgW 362
                       a  p++    r+ vE+ +lgrei nv+a +g  r  r+  +++W+  l + GF     +  a+  a+ l   ++ + gy+v ++++  v lgW
  TRIDC1BG051140.2 345 AARPADGdASRHLVENGVLGREIGNVLAVAGPTRSGRE-MFGSWQVELARNGFL----RAGAVGRAQVLAGACPaGLGYTVADDHDGTVrLGW 432
                       6666665499***********************88875.5*************5....5668899999******999*****88666666*** PP

              GRAS 363 kdrpLvsvSaWr 374
                       k+ pL++vS W+
  TRIDC1BG051140.2 433 KGTPLYAVSTWT 444
                       ***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    
CSSMITTSTC TAAAPALSCL NTTASSTPGT IAAPEVEFDA CKEGGGDVAV VGQERQQHDQ  60
DAPKPGEEEK EAQGVRMIAL LMECAVAMSV GNLADANGTL LELSQMASPY APSCGERLVA  120
YFARAMAARL MSSWVGVCAP VHPSSASSWS GVHAAFRAFH NVAPFARCAY LACNQAILEA  180
FRGKRLVHVV DLDVVPGGAL QWLSLLSALA ARPGGPPVLR VTGFGVSASA LHDAGTQLAG  240
LATKLGMPFE FYAVAKRPGD VVDAVADLPS RRPGEVVAVH WLRHALYDAA GDDVVTMRLV  300
RWLEPKVVTL VEQERGPAGG DGGQFLDRFV AALHHYSAVF DALGAARPAD GDASRHLVEN  360
GVLGREIGNV LAVAGPTRSG REMFGSWQVE LARNGFLRAG AVGRAQVLAG ACPAGLGYTV  420
ADDHDGTVRL GWKGTPLYAV STWTCCTTAH ARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.17e-88GRAS family protein