PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG052310.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 64aa MW: 7182.45 Da PI: 9.2434

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG052310.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	47.3	4.5e-15	4	59	18	73
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrt 73 ++++P rikki++adedv +i+ +Pvl+ska elf+ +l r+++ + e+ +t TRIDC1BG052310.3 4 DTRFPAPRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYNITVEKGVKT 59 5789*******************************************999976554 PP

Sequence ? help Back to Top
Protein Sequence Length: 64 aa Download sequence
KKLDTRFPAP RIKKIMQADE DVGKIALAVP VLVSKALELF LQDLCDRTYN ITVEKGVKTE 60 TVHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12480.1	2e-33	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG052310.3