PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG053060.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 192aa    MW: 20785.4 Da    PI: 10.688
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG053060.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.5e-194190255
               AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr ++ +gr++AeIrd ++    ++r++lg+++ta +Aa a+++a+ +l+g
  TRIDC1BG053060.2 41 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTYDTAVDAALAYDRAAVALRG 90
                      69*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
EQERGRGAMQ MLPEARGHRS SSVGGGGAGA GGRADAHAQG HYRGVRKRPW GRYAAEIRDP  60
WKKTRVWLGT YDTAVDAALA YDRAAVALRG PKARTNFASG HLAPHQHQQQ ACLPPRPPAR  120
PFGGRLDVAH PSPWHFVYFP SRLQELLAQP LPAHGARDAA PSPPSTVLEL RTGPSSCPQF  180
DLNEPPPLMF GS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.11e-20ERF family protein