PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG053090.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 244aa    MW: 24700.5 Da    PI: 8.9955
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG053090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.23.1e-213788156
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      ++y+GVr ++ +gr++AeIrdp    k+ r++lg+++taeeAa+a++aa+++++g+
  TRIDC1BG053090.1 37 PHYRGVRKRP-WGRYAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREYRGN 88
                      68********.**********83...36**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MAPRTSDKTA TPPAAGAAVT GLALGVGGGG NGGGVGPHYR GVRKRPWGRY AAEIRDPAKK  60
SRVWLGTYDT AEEAARAYDA AAREYRGNKA KTNFPFASAS APPAAAALTG DGSRSSNSST  120
VESFGGDVQA PMQAMPLPPS LDLDLFHRAA TSTAGAGAGA GAGAGMRFPF SGYPVSHPYY  180
FFGQAAAAAA GGCHMYSQAP KVTVASVSPS DSDSSSVVDL APSPPSRKPV PFDLDLNCPP  240
PAEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.14e-16ERF family protein