PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG053140.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 199aa    MW: 22887.9 Da    PI: 4.4379
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG053140.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37.4e-085092145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      r +WT+ + +l++++ +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC1BG053140.2 50 RAKWTKSDTDLFYQGLRQFGSD-FAMIQQLFP-DKSRDQVRQKFK 92
                      569*******************.*********.********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
LMSFHSSSHF GDTDDFDPFG DNYDNDRTEN HALENATKLN YHSYMDKKTR AKWTKSDTDL  60
FYQGLRQFGS DFAMIQQLFP DKSRDQVRQK FKSEDKKHPM QVHDAILHRS RDNLYLKQVM  120
KQLNIEDSLK DINSTQKQEV ASTEGNTGND VISETNISVE NVSNLSDEEM GTLQSEVKEG  180
EDVAAGNADD VDLDVFDWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.12e-28MYB_related family protein