PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG053140.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 248aa    MW: 28450.3 Da    PI: 4.6457
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG053140.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81.1e-0799141145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       r +WT+ + +l++++ +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC1BG053140.6  99 RAKWTKSDTDLFYQGLRQFGSD-FAMIQQLFP-DKSRDQVRQKFK 141
                       569*******************.*********.********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
CIFGLCCFIE VQTLLQKPDH EIDRMKLSVT HLRLLQEARE RIQSKTPSGP SSSNQSSHFG  60
DTDDFDPFGD NYDNDRTENH ALENATKLNY HSYMDKKTRA KWTKSDTDLF YQGLRQFGSD  120
FAMIQQLFPD KSRDQVRQKF KSEDKKHPMQ VHDAILHRSR DNLYLKQVMK QLNIEDSLKD  180
INSTQKQEVA STEGNTGNDV ISETNISVEN VSNLSDEEMG TLQSEVKEGE DVAAGNADDV  240
DLDVFDWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.12e-27MYB_related family protein