PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055240.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 258aa MW: 29220.5 Da PI: 8.4154

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055240.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	46.1	1e-14	22	59	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C Ckks+Clk+YC Cfa g +Cse+C C C+Nk TRIDC1BG055240.5 22 CKHCACKKSRCLKLYCPCFAGGGYCSEKCGCVPCFNKA 59 89**********************************97 PP
2	TCR	50.2	5.3e-16	138	174	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++gCnCkks+ClkkYC+C+++g+ Cs C+CedCkN TRIDC1BG055240.5 138 RRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCEDCKNP 174 589*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MNQLALATTP KRQKVEDAAD GCKHCACKKS RCLKLYCPCF AGGGYCSEKC GCVPCFNKAD 60 FAETVQTTRK VLLSRQKRMS LKINRRLEAN AETMVVFLTQ LDDVAFLSSF WLIIIISILC 120 LCHLQEDAHN SSSSTPPRRG CNCKKSSCLK KYCDCYQDGT GCSLFCRCED CKNPYGKNEG 180 FMADESKRFI YTGADLDHSE DEHDFIVERS PRLQSPISKE SSFQHTPPRS KASSRDTHLL 240 PQVLLQWQPR SWQQSSKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	1e-37	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055240.5