PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055320.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 807aa MW: 91906.8 Da PI: 7.2237

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055320.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.4	3.5e-16	203	284	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF vr+ +++++ +k ++ C+++gk +++++ k++r+++ C+ak+ vk++ +++we + +++eHnH+l+p TRIDC1BG055320.2 203 RFYSTHAMLTGFAVRRGSNYRR------VKFDLECNRSGKLKPTEDL--KRKRRSNALGSRCQAKVIVKLH-NEQWEFIGVKHEHNHPLCP 284 5******************9......7889*******9988..555555566789*****9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 807 aa Download sequence
PPSASPLVPS QAAAAQSTHR VPNPPNQEQR AAADAQMQAA VDNLGEQAPG PAPATNLEQV 60 AMTHPVEPNH SGAGLHIEKE NVGRQATPGG RLQLTVGNGQ EHASNGIGTA AQGLLTDTSD 120 KQSNSVDTRM QRHAEEQDQL HGVTQGHEMS SNDTSSGSDS GSSSGSELDT ELGKCFYPSF 180 EELENSRPPE IGMRFPTLED AERFYSTHAM LTGFAVRRGS NYRRVKFDLE CNRSGKLKPT 240 EDLKRKRRSN ALGSRCQAKV IVKLHNEQWE FIGVKHEHNH PLCPSPSLAS FFLNHKYLSS 300 EEKLFLRVLQ QSRVNPRKAM NIFRRMRSNF RKVSSIKEKV TSNSQCANQW RKENSDVETA 360 LKRFKELELR NLGFSYTMQK DEDNIVRSLF WTDARSKVDY EIFGDFISFN TTYSTNRNNM 420 PFTPIIGMNS HGRILVFGCA LLQDQKAETF KWMFQTFLHV MGGKLPRIVI TDQDEGMATA 480 ISEVMPQVRH RFCKFSVMRK AQEMLGAFMA ARSNMNAELH GLVDNSVTEK EFEEGWDVLT 540 ERYDASQNEY LRLMWETRKN WVPVYFQADF CPFVESAGHC EVANLLFKDN VLPKDRIEKF 600 IEQYERMQEH IVKTEEEDAL QSATEPAYFS MQPIEKHAAR IYTRQIFLIA QNELYYSTAF 660 NVHEIQGGYR LEKVFNYENP EFSRNSFEVL AEPGTHAFKC QCAKFTRDGI LCCHIFRVFT 720 QLGVKEIPAQ YMLPRWAPKF IEDRLKEYEE RCSKRRENKT RYAMLLGKMA DIGKGICADG 780 AKSGCFMLEL DKVQETLATT AEEIPRK

Sequence ? help Back to Top

Protein Sequence Length: 807 aa Download sequence

PPSASPLVPS QAAAAQSTHR VPNPPNQEQR AAADAQMQAA VDNLGEQAPG PAPATNLEQV  60
AMTHPVEPNH SGAGLHIEKE NVGRQATPGG RLQLTVGNGQ EHASNGIGTA AQGLLTDTSD  120
KQSNSVDTRM QRHAEEQDQL HGVTQGHEMS SNDTSSGSDS GSSSGSELDT ELGKCFYPSF  180
EELENSRPPE IGMRFPTLED AERFYSTHAM LTGFAVRRGS NYRRVKFDLE CNRSGKLKPT  240
EDLKRKRRSN ALGSRCQAKV IVKLHNEQWE FIGVKHEHNH PLCPSPSLAS FFLNHKYLSS  300
EEKLFLRVLQ QSRVNPRKAM NIFRRMRSNF RKVSSIKEKV TSNSQCANQW RKENSDVETA  360
LKRFKELELR NLGFSYTMQK DEDNIVRSLF WTDARSKVDY EIFGDFISFN TTYSTNRNNM  420
PFTPIIGMNS HGRILVFGCA LLQDQKAETF KWMFQTFLHV MGGKLPRIVI TDQDEGMATA  480
ISEVMPQVRH RFCKFSVMRK AQEMLGAFMA ARSNMNAELH GLVDNSVTEK EFEEGWDVLT  540
ERYDASQNEY LRLMWETRKN WVPVYFQADF CPFVESAGHC EVANLLFKDN VLPKDRIEKF  600
IEQYERMQEH IVKTEEEDAL QSATEPAYFS MQPIEKHAAR IYTRQIFLIA QNELYYSTAF  660
NVHEIQGGYR LEKVFNYENP EFSRNSFEVL AEPGTHAFKC QCAKFTRDGI LCCHIFRVFT  720
QLGVKEIPAQ YMLPRWAPKF IEDRLKEYEE RCSKRRENKT RYAMLLGKMA DIGKGICADG  780
AKSGCFMLEL DKVQETLATT AEEIPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-73	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055320.2