PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055320.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 804aa MW: 91836.8 Da PI: 7.3266

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055320.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.4	3.5e-16	200	281	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF vr+ +++++ +k ++ C+++gk +++++ k++r+++ C+ak+ vk++ +++we + +++eHnH+l+p TRIDC1BG055320.5 200 RFYSTHAMLTGFAVRRGSNYRR------VKFDLECNRSGKLKPTEDL--KRKRRSNALGSRCQAKVIVKLH-NEQWEFIGVKHEHNHPLCP 281 5******************9......7889*******9988..555555566789*****9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
CFSARPLAGR SRSEHTQVPN PPNQEQRAAA DAQMQAAVDN LGEQAPGPAP ATNLEQVAMT 60 HPVEPNHSGA GLHIEKENVG RQATPGGRLQ LTVGNGQEHA SNGIGTAAQG LLTDTSDKQS 120 NSVDTRMQRH AEEQDQLHGV TQGHEMSSND TSSGSDSGSS SGSELDTELG KCFYPSFEEL 180 ENSRPPEIGM RFPTLEDAER FYSTHAMLTG FAVRRGSNYR RVKFDLECNR SGKLKPTEDL 240 KRKRRSNALG SRCQAKVIVK LHNEQWEFIG VKHEHNHPLC PSPSLASFFL NHKYLSSEEK 300 LFLRVLQQSR VNPRKAMNIF RRMRSNFRKV SSIKEKVTSN SQCANQWRKE NSDVETALKR 360 FKELELRNLG FSYTMQKDED NIVRSLFWTD ARSKVDYEIF GDFISFNTTY STNRNNMPFT 420 PIIGMNSHGR ILVFGCALLQ DQKAETFKWM FQTFLHVMGG KLPRIVITDQ DEGMATAISE 480 VMPQVRHRFC KFSVMRKAQE MLGAFMAARS NMNAELHGLV DNSVTEKEFE EGWDVLTERY 540 DASQNEYLRL MWETRKNWVP VYFQADFCPF VESAGHCEVA NLLFKDNVLP KDRIEKFIEQ 600 YERMQEHIVK TEEEDALQSA TEPAYFSMQP IEKHAARIYT RQIFLIAQNE LYYSTAFNVH 660 EIQGGYRLEK VFNYENPEFS RNSFEVLAEP GTHAFKCQCA KFTRDGILCC HIFRVFTQLG 720 VKEIPAQYML PRWAPKFIED RLKEYEERCS KRRENKTRYA MLLGKMADIG KGICADGAKS 780 GCFMLELDKV QETLATTAEE IPRK

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

CFSARPLAGR SRSEHTQVPN PPNQEQRAAA DAQMQAAVDN LGEQAPGPAP ATNLEQVAMT  60
HPVEPNHSGA GLHIEKENVG RQATPGGRLQ LTVGNGQEHA SNGIGTAAQG LLTDTSDKQS  120
NSVDTRMQRH AEEQDQLHGV TQGHEMSSND TSSGSDSGSS SGSELDTELG KCFYPSFEEL  180
ENSRPPEIGM RFPTLEDAER FYSTHAMLTG FAVRRGSNYR RVKFDLECNR SGKLKPTEDL  240
KRKRRSNALG SRCQAKVIVK LHNEQWEFIG VKHEHNHPLC PSPSLASFFL NHKYLSSEEK  300
LFLRVLQQSR VNPRKAMNIF RRMRSNFRKV SSIKEKVTSN SQCANQWRKE NSDVETALKR  360
FKELELRNLG FSYTMQKDED NIVRSLFWTD ARSKVDYEIF GDFISFNTTY STNRNNMPFT  420
PIIGMNSHGR ILVFGCALLQ DQKAETFKWM FQTFLHVMGG KLPRIVITDQ DEGMATAISE  480
VMPQVRHRFC KFSVMRKAQE MLGAFMAARS NMNAELHGLV DNSVTEKEFE EGWDVLTERY  540
DASQNEYLRL MWETRKNWVP VYFQADFCPF VESAGHCEVA NLLFKDNVLP KDRIEKFIEQ  600
YERMQEHIVK TEEEDALQSA TEPAYFSMQP IEKHAARIYT RQIFLIAQNE LYYSTAFNVH  660
EIQGGYRLEK VFNYENPEFS RNSFEVLAEP GTHAFKCQCA KFTRDGILCC HIFRVFTQLG  720
VKEIPAQYML PRWAPKFIED RLKEYEERCS KRRENKTRYA MLLGKMADIG KGICADGAKS  780
GCFMLELDKV QETLATTAEE IPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-74	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055320.5