PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055320.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 798aa MW: 91072.9 Da PI: 7.2237

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055320.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.5	3.4e-16	194	275	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF vr+ +++++ +k ++ C+++gk +++++ k++r+++ C+ak+ vk++ +++we + +++eHnH+l+p TRIDC1BG055320.6 194 RFYSTHAMLTGFAVRRGSNYRR------VKFDLECNRSGKLKPTEDL--KRKRRSNALGSRCQAKVIVKLH-NEQWEFIGVKHEHNHPLCP 275 5******************9......7889*******9988..555555566789*****9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
QAAAAQSTHR VPNPPNQEQR AAADAQMQAA VDNLGEQAPG PAPATNLEQV AMTHPVEPNH 60 SGAGLHIEKE NVGRQATPGG RLQLTVGNGQ VEHASNGIGT AAQGLLTDTS DKQSNSVDTR 120 MQRHAEEQDQ LHGVTQGHEM SSNDTSSGSD SGSSSGSELD TELGKCFYPS FEELENSRPP 180 EIGMRFPTLE DAERFYSTHA MLTGFAVRRG SNYRRVKFDL ECNRSGKLKP TEDLKRKRRS 240 NALGSRCQAK VIVKLHNEQW EFIGVKHEHN HPLCPSPSLA SFFLNHKYLS SEEKLFLRVL 300 QQSRVNPRKA MNIFRRMRSN FRKVSSIKEK VTSNSQCANQ WRKENSDVET ALKRFKELEL 360 RNLGFSYTMQ KDEDNIVRSL FWTDARSKVD YEIFGDFISF NTTYSTNRNN MPFTPIIGMN 420 SHGRILVFGC ALLQDQKAET FKWMFQTFLH VMGGKLPRIV ITDQDEGMAT AISEVMPQVR 480 HRFCKFSVMR KAQEMLGAFM AARSNMNAEL HGLVDNSVTE KEFEEGWDVL TERYDASQNE 540 YLRLMWETRK NWVPVYFQAD FCPFVESAGH CEVANLLFKD NVLPKDRIEK FIEQYERMQE 600 HIVKTEEEDA LQSATEPAYF SMQPIEKHAA RIYTRQIFLI AQNELYYSTA FNVHEIQGGY 660 RLEKVFNYEN PEFSRNSFEV LAEPGTHAFK CQCAKFTRDG ILCCHIFRVF TQLGVKEIPA 720 QYMLPRWAPK FIEDRLKEYE ERCSKRRENK TRYAMLLGKM ADIGKGICAD GAKSGCFMLE 780 LDKVQETLAT TAEEIPRK

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

QAAAAQSTHR VPNPPNQEQR AAADAQMQAA VDNLGEQAPG PAPATNLEQV AMTHPVEPNH  60
SGAGLHIEKE NVGRQATPGG RLQLTVGNGQ VEHASNGIGT AAQGLLTDTS DKQSNSVDTR  120
MQRHAEEQDQ LHGVTQGHEM SSNDTSSGSD SGSSSGSELD TELGKCFYPS FEELENSRPP  180
EIGMRFPTLE DAERFYSTHA MLTGFAVRRG SNYRRVKFDL ECNRSGKLKP TEDLKRKRRS  240
NALGSRCQAK VIVKLHNEQW EFIGVKHEHN HPLCPSPSLA SFFLNHKYLS SEEKLFLRVL  300
QQSRVNPRKA MNIFRRMRSN FRKVSSIKEK VTSNSQCANQ WRKENSDVET ALKRFKELEL  360
RNLGFSYTMQ KDEDNIVRSL FWTDARSKVD YEIFGDFISF NTTYSTNRNN MPFTPIIGMN  420
SHGRILVFGC ALLQDQKAET FKWMFQTFLH VMGGKLPRIV ITDQDEGMAT AISEVMPQVR  480
HRFCKFSVMR KAQEMLGAFM AARSNMNAEL HGLVDNSVTE KEFEEGWDVL TERYDASQNE  540
YLRLMWETRK NWVPVYFQAD FCPFVESAGH CEVANLLFKD NVLPKDRIEK FIEQYERMQE  600
HIVKTEEEDA LQSATEPAYF SMQPIEKHAA RIYTRQIFLI AQNELYYSTA FNVHEIQGGY  660
RLEKVFNYEN PEFSRNSFEV LAEPGTHAFK CQCAKFTRDG ILCCHIFRVF TQLGVKEIPA  720
QYMLPRWAPK FIEDRLKEYE ERCSKRRENK TRYAMLLGKM ADIGKGICAD GAKSGCFMLE  780
LDKVQETLAT TAEEIPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-74	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055320.6