PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055360.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 768aa MW: 88076.9 Da PI: 6.922

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055360.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.6	6.3e-16	160	241	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF r+ +++k+ k ++ C+++gk +++++ +++r+ ++ +C+ak+ vk++ +++we t +++eHnH+l+p TRIDC1BG055360.3 160 RFYSTHAMLTGFAARRGTNYKR------RKFHLLCNRSGKLKPTQDL--QRKRKVNVLGSQCQAKVIVKLH-NEQWEFTGVKHEHNHPLCP 241 5******************9......5678*******9988..88888889999******9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 768 aa Download sequence
QTSGPVPATN FEQQVVMTYP DRALEPSHSG AGLRMEKKHV GKQAIPEGGL QSIGEINQGH 60 ASNGIGTTVQ GLLADMLHKQ TNSVDPTVQQ AEEQDQLHDV TEGHELCSND TSSGSDAGSS 120 SGSELDTELG KCFYPSIEAL ENSRPPEVGM KFPTLEDAER FYSTHAMLTG FAARRGTNYK 180 RRKFHLLCNR SGKLKPTQDL QRKRKVNVLG SQCQAKVIVK LHNEQWEFTG VKHEHNHPLC 240 PSPSLTSFFL DHKYLSSEEK LFLRVLQQSR VNPRKAMNIF QRMRSNFGNV SSSNEKDMSN 300 SQCVDQWRKE NSDVETSLKR FKELELRNLG FSYTMQKDED NIVRTLFWTD ARSKVDYEIF 360 GDFIAFSTTY STNRHNMPFT PIIGVNNHGR ILVFGCALLQ DQKAETFKWM FQTFLHVMRG 420 KLPKTIIIDQ DEGMVKAIAE VMPQVRHRLC KFSVMRKAQE ILGAFMAARG NMNAELHSLV 480 DNSLTEKEFE EGWAVLIERY DASENEYLRL MWKTRKNWVP VYFQADFYPF VESAEHGEGS 540 NLLFKDNVLP KDRIEKFIEQ YERIQEGIVK TEEEDTLQSA TEPAYFSMQP IEKHAARIYT 600 RQIFLRVQKE LYYSTALNAH EIQGGAAYRL EKVFDYENPE FDRNSFEVLV EPGTHTFKCQ 660 CAKFTRDGIL CCHIFRVFTQ LGVIEIPAQY IVPRWAREFR EERLKEYEEK CSKRTEDRKR 720 CAMLLGKMAD IGKGVCADSA KSGCFMLELD KVQEKLVGAD DQIVLWSK

Sequence ? help Back to Top

Protein Sequence Length: 768 aa Download sequence

QTSGPVPATN FEQQVVMTYP DRALEPSHSG AGLRMEKKHV GKQAIPEGGL QSIGEINQGH  60
ASNGIGTTVQ GLLADMLHKQ TNSVDPTVQQ AEEQDQLHDV TEGHELCSND TSSGSDAGSS  120
SGSELDTELG KCFYPSIEAL ENSRPPEVGM KFPTLEDAER FYSTHAMLTG FAARRGTNYK  180
RRKFHLLCNR SGKLKPTQDL QRKRKVNVLG SQCQAKVIVK LHNEQWEFTG VKHEHNHPLC  240
PSPSLTSFFL DHKYLSSEEK LFLRVLQQSR VNPRKAMNIF QRMRSNFGNV SSSNEKDMSN  300
SQCVDQWRKE NSDVETSLKR FKELELRNLG FSYTMQKDED NIVRTLFWTD ARSKVDYEIF  360
GDFIAFSTTY STNRHNMPFT PIIGVNNHGR ILVFGCALLQ DQKAETFKWM FQTFLHVMRG  420
KLPKTIIIDQ DEGMVKAIAE VMPQVRHRLC KFSVMRKAQE ILGAFMAARG NMNAELHSLV  480
DNSLTEKEFE EGWAVLIERY DASENEYLRL MWKTRKNWVP VYFQADFYPF VESAEHGEGS  540
NLLFKDNVLP KDRIEKFIEQ YERIQEGIVK TEEEDTLQSA TEPAYFSMQP IEKHAARIYT  600
RQIFLRVQKE LYYSTALNAH EIQGGAAYRL EKVFDYENPE FDRNSFEVLV EPGTHTFKCQ  660
CAKFTRDGIL CCHIFRVFTQ LGVIEIPAQY IVPRWAREFR EERLKEYEEK CSKRTEDRKR  720
CAMLLGKMAD IGKGVCADSA KSGCFMLELD KVQEKLVGAD DQIVLWSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	4e-81	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055360.3