PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055360.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 736aa MW: 84683.2 Da PI: 6.9867

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055360.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.7	5.9e-16	128	209	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF r+ +++k+ k ++ C+++gk +++++ +++r+ ++ +C+ak+ vk++ +++we t +++eHnH+l+p TRIDC1BG055360.4 128 RFYSTHAMLTGFAARRGTNYKR------RKFHLLCNRSGKLKPTQDL--QRKRKVNVLGSQCQAKVIVKLH-NEQWEFTGVKHEHNHPLCP 209 5******************9......5678*******9988..88888889999******9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
YLLTQKHVGK QAIPEGGLQS IGEINQGHAS NGIGTTVQGL LADMLHKQTN SVDPTVQQAE 60 EQDQLHDVTE GHELCSNDTS SGSDAGSSSG SELDTELGKC FYPSIEALEN SRPPEVGMKF 120 PTLEDAERFY STHAMLTGFA ARRGTNYKRR KFHLLCNRSG KLKPTQDLQR KRKVNVLGSQ 180 CQAKVIVKLH NEQWEFTGVK HEHNHPLCPS PSLTSFFLDH KYLSSEEKLF LRVLQQSRVN 240 PRKAMNIFQR MRSNFGNVSS SNEKDMSNSQ CVDQWRKENS DVETSLKRFK ELELRNLGFS 300 YTMQKDEDNI VRTLFWTDAR SKVDYEIFGD FIAFSTTYST NRHNMPFTPI IGVNNHGRIL 360 VFGCALLQDQ KAETFKWMFQ TFLHVMRGKL PKTIIIDQDE GMVKAIAEVM PQVRHRLCKF 420 SVMRKAQEIL GAFMAARGNM NAELHSLVDN SLTEKEFEEG WAVLIERYDA SENEYLRLMW 480 KTRKNWVPVY FQADFYPFVE SAEHGEGSNL LFKDNVLPKD RIEKFIEQYE RIQEGIVKTE 540 EEDTLQSATE PAYFSMQPIE KHAARIYTRQ IFLRVQKELY YSTALNAHEI QGGAAYRLEK 600 VFDYENPEFD RNSFEVLVEP GTHTFKCQCA KFTRDGILCC HIFRVFTQLG VIEIPAQYIV 660 PRWAREFREE RLKEYEEKCS KRTEDRKRCA MLLGKMADIG KGVCADSAKS GCFMLELDKV 720 QEKLVGADDQ IVLWSK

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

YLLTQKHVGK QAIPEGGLQS IGEINQGHAS NGIGTTVQGL LADMLHKQTN SVDPTVQQAE  60
EQDQLHDVTE GHELCSNDTS SGSDAGSSSG SELDTELGKC FYPSIEALEN SRPPEVGMKF  120
PTLEDAERFY STHAMLTGFA ARRGTNYKRR KFHLLCNRSG KLKPTQDLQR KRKVNVLGSQ  180
CQAKVIVKLH NEQWEFTGVK HEHNHPLCPS PSLTSFFLDH KYLSSEEKLF LRVLQQSRVN  240
PRKAMNIFQR MRSNFGNVSS SNEKDMSNSQ CVDQWRKENS DVETSLKRFK ELELRNLGFS  300
YTMQKDEDNI VRTLFWTDAR SKVDYEIFGD FIAFSTTYST NRHNMPFTPI IGVNNHGRIL  360
VFGCALLQDQ KAETFKWMFQ TFLHVMRGKL PKTIIIDQDE GMVKAIAEVM PQVRHRLCKF  420
SVMRKAQEIL GAFMAARGNM NAELHSLVDN SLTEKEFEEG WAVLIERYDA SENEYLRLMW  480
KTRKNWVPVY FQADFYPFVE SAEHGEGSNL LFKDNVLPKD RIEKFIEQYE RIQEGIVKTE  540
EEDTLQSATE PAYFSMQPIE KHAARIYTRQ IFLRVQKELY YSTALNAHEI QGGAAYRLEK  600
VFDYENPEFD RNSFEVLVEP GTHTFKCQCA KFTRDGILCC HIFRVFTQLG VIEIPAQYIV  660
PRWAREFREE RLKEYEEKCS KRTEDRKRCA MLLGKMADIG KGVCADSAKS GCFMLELDKV  720
QEKLVGADDQ IVLWSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	4e-81	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055360.4