PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG056140.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 168aa    MW: 18748.3 Da    PI: 11.5784
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG056140.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP100.62.7e-3153148395
               TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg.... 88 
                       g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++a+++i++l+ ++++++ +    +       a++++++    
  TRIDC1BG056140.2  53 GGKDRHSKVRTVKGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAQHEIDKLPPLQFPPHDDDlllS-------AHHHHHHlqpt 138
                       78******************************************************************4333442.......33333332222 PP

               TCP  89 ...kaaksaa 95 
                           +++ a+
  TRIDC1BG056140.2 139 ssmTSMAMAP 148
                       2112222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
RLEMISAGDH GNDRRKFEPA AAGNKALQAA AAASRHWSAS TESRIVRVSR VFGGKDRHSK  60
VRTVKGLRDR RVRLSVPTAI QLYDLQDRLG LSQPSKVVDW LLNAAQHEID KLPPLQFPPH  120
DDDLLLSAHH HHHHLQPTSS MTSMAMAPPF SRQRRPTTEA AILRGSRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.15e-42TCP family protein