PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG056140.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 240aa MW: 25578.4 Da PI: 6.2764

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG056140.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	61.4	3.5e-19	1	85	22	101
TCP 22 vRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg........kaaksaa.kskksq 101 vRls+++a++++dLqd+LG+ ++sk ++WLl++a+++i++l+ ++++++ + + a++++++ + a + + ++ ++ TRIDC1BG056140.3 1 VRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAQHEIDKLPPLQFPPHDDDlllS-------AHHHHHHlqptssmtSMAMAPPfSHATAT 85 8************************************************4333442.......33333333333212211111111222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
VRLSVPTAIQ LYDLQDRLGL SQPSKVVDWL LNAAQHEIDK LPPLQFPPHD DDLLLSAHHH 60 HHHLQPTSSM TSMAMAPPFS HATATAVAAS MMVVDSDKAA QAHDGGGDLK GFTSLSNSLG 120 LVNGAGAAMP TLAAAQAGSY HHHYAAHEAW SNGGNNVHEQ LGGHRSSPHV VPHHGLPFPS 180 LLSLAPVSQF VFYTPEGGFA MKDVASDGQF PVDNLDDSQG QLSLSSRGEA FFTQEARVDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-22	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG056140.3