PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG056400.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 236aa    MW: 26762.1 Da    PI: 9.5429
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG056400.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B380.51.7e-2533134199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d++g +W++++iyr++++r++lt+GW++Fv+ ++L +gD v+F   + 
  TRIDC1BG056400.6  33 FCKTLTASDTSTHGGFSVPRRAAEDCfapldyKQV-RPSQELVAKDLDGTQWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFL--RG 122
                       99****************************97444.34579************************************************..34 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       +++el+++v+r+
  TRIDC1BG056400.6 123 DDGELRLGVRRA 134
                       89999****996 PP
2Auxin_resp94.61.5e-31159236179
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkW 79 
                       +a++++++ +F+v++ Pr+++seF+v++++++k+l++++s+GmRfk + e++d++er+ +G+++g+s++dp+rWp+SkW
  TRIDC1BG056400.6 159 VASSLENRRIFHVCFDPRSGASEFIVPYWRFSKSLNHPFSIGMRFKDSNESDDANERS-TGLISGISEVDPIRWPGSKW 236
                       578899***************************************************9.9******************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MFRQNVRESA PEEGEDEMAG GDGEKKPRML HMFCKTLTAS DTSTHGGFSV PRRAAEDCFA  60
PLDYKQVRPS QELVAKDLDG TQWRFRHIYR GQPRRHLLTT GWSSFVNKKK LVSGDAVLFL  120
RGDDGELRLG VRRAVQLRNE ALFKAVNSNE SKLHTLSAVA SSLENRRIFH VCFDPRSGAS  180
EFIVPYWRFS KSLNHPFSIG MRFKDSNESD DANERSTGLI SGISEVDPIR WPGSKW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.13e-97ARF family protein