PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG056900.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 571aa MW: 62833.9 Da PI: 4.2043

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG056900.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	35.8	1.4e-11	469	509	13	53
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++L e F+ ++yps++ +e LA++lgLt rqV WF rR TRIDC1BG056900.10 469 QRLHEQFKTDQYPSRAVKESLAQELGLTFRQVEKWFESRRR 509 6899***********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MQNDVADLPS DDSEDDDFDP NISEEHVAGH AEGSSEEDGD EGSDSDDSNF MTSSDNSEHV 60 KEKVKVDDLG LPSEDSEDDD YDPAGPDSDK DIEEKQDESD FTSDSDEFCA EITKSCSKDE 120 VSSGPKVGGR TNDLEGAPVR PNTSMSHSKD LEIDPDVILP STKRQVQRLD YKKLYDDTYG 180 EAPSESSDGD EWSGKSTLKE DNEERNEVDS FARKSSRGTR AVHPDGFHGL VNDQHRLNQY 240 FTTDQYPSRA VKEISHSSDK SENRKTKRKV DDLGLPSEDS EDDDYDPASP DSDKDIEEKQ 300 DESDFSSDSD DFCVEIAKSC CGQEGVPSGA KVGADRTDDL EGTTICANAA ISNLPSKDPE 360 MDQYVVLPVS ARQKVQSPDS KKLAEDAYGR APSDSSYSEE LSKKGTPEKD KGKESEAGSF 420 VRQSNEFTPQ RSQQSFHGSV NGQNAEELLT PNGSSTTGQK RQYGPIINQR LHEQFKTDQY 480 PSRAVKESLA QELGLTFRQV EKWFESRRRH IRVASNKGST HVENHSTKEN PNECKSDALN 540 EDTPSGILNE GITQDGPLKQ DIGGGLKTNA S

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MQNDVADLPS DDSEDDDFDP NISEEHVAGH AEGSSEEDGD EGSDSDDSNF MTSSDNSEHV  60
KEKVKVDDLG LPSEDSEDDD YDPAGPDSDK DIEEKQDESD FTSDSDEFCA EITKSCSKDE  120
VSSGPKVGGR TNDLEGAPVR PNTSMSHSKD LEIDPDVILP STKRQVQRLD YKKLYDDTYG  180
EAPSESSDGD EWSGKSTLKE DNEERNEVDS FARKSSRGTR AVHPDGFHGL VNDQHRLNQY  240
FTTDQYPSRA VKEISHSSDK SENRKTKRKV DDLGLPSEDS EDDDYDPASP DSDKDIEEKQ  300
DESDFSSDSD DFCVEIAKSC CGQEGVPSGA KVGADRTDDL EGTTICANAA ISNLPSKDPE  360
MDQYVVLPVS ARQKVQSPDS KKLAEDAYGR APSDSSYSEE LSKKGTPEKD KGKESEAGSF  420
VRQSNEFTPQ RSQQSFHGSV NGQNAEELLT PNGSSTTGQK RQYGPIINQR LHEQFKTDQY  480
PSRAVKESLA QELGLTFRQV EKWFESRRRH IRVASNKGST HVENHSTKEN PNECKSDALN  540
EDTPSGILNE GITQDGPLKQ DIGGGLKTNA S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	8e-11	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG056900.10