PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG057210.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 300aa    MW: 32289.7 Da    PI: 10.0045
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG057210.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.73.3e-18173207135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC1BG057210.2 173 CLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRL 207
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
VARIYQILAD ELFTVNAFYD QLAELEWLSN YMGDDNFPTE DLRKLQLISG IPSASSQTAP  60
RAPAAPVQPC GGGGVGTALW RSEAHAGQVS VPGKARSKRS RVAPCNWSSR LLVLPPAPAS  120
PPSPASAVIS PSESGTAFPL FPNKKPAKSS KKEGPAAPAM TAAEAAAAEG RRCLHCETDK  180
TPQWRTGPLG PKTLCNACGV RYKSGRLVPE YRPAASPTFV PSKHSNSHRK VVELRRQKDT  240
PQQQLLHHSQ HQPPQQQHQL GPGLGFQVPS PLLFDGPHLG GGADEFLIRN RIGPDHRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-56GATA family protein