PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG060230.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 253aa    MW: 28599.8 Da    PI: 6.893
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG060230.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.68.8e-11157200447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT +E++l++++   +G g+Wk I++++ +++t  q+ s+ qky
  TRIDC1BG060230.2 157 WTIDEHKLFLRGLGVYGRGDWKNISKHFVTTKTHVQVSSHAQKY 200
                       *******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
HSSYYPQVCN FDLSSLMDPL VNQGWTSSEE EEARSAIARH NSHTIVYDDK NKRHNNIVDA  60
LHELFPSKTR QQEIGASNIC GINTMGVHVI GGYGIREEEE AATMNDNGLI FGHALEDTRI  120
METKEAPLMV HKNKMQILEN NITNDQPVVP PRQGRFWTID EHKLFLRGLG VYGRGDWKNI  180
SKHFVTTKTH VQVSSHAQKY FRRLHKRASF GTQRYSINDV GLHDEDPWSM NNSSGPSQTL  240
GSTGLNNETS LGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.15e-19MYB family protein