PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG060230.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 299aa    MW: 33613.4 Da    PI: 6.5582
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG060230.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.31.1e-10203246447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       WT +E++l++++   +G g+Wk I++++ +++t  q+ s+ qky
  TRIDC1BG060230.3 203 WTIDEHKLFLRGLGVYGRGDWKNISKHFVTTKTHVQVSSHAQKY 246
                       *******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
HSSYYPQVCN FDLSSLMDPL VNQGWTSSEE EEARSAIARH NSHTIVYDDK NKRHNNIVDA  60
LHELFPSKTR QQVTDLYVNL AVESYMMHSG EERHVVGSNT HSVGPINLVN NNFGVSDQEI  120
GASNICGINT MGVHVIGGYG IREEEEAATM NDNGLIFGHA LEDTRIMETK EAPLMVHKNK  180
MQILENNITN DQPVVPPRQG RFWTIDEHKL FLRGLGVYGR GDWKNISKHF VTTKTHVQVS  240
SHAQKYFRRL HKRASFGTQR YSINDVGLHD EDPWSMNNSS GPSQTLGSTG LNNETSLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.18e-19MYB family protein