PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061010.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 321aa    MW: 37675.7 Da    PI: 9.1805
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061010.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR164.23.8e-2019104191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fY++YAk+ GF v ++++++  ++ + +  t+ C+++gk++ ++k+   + +++++tr++C ak++ +++ ++k+++t++ l+HnH+++p
  TRIDC1BG061010.2  19 NFYKDYAKKEGFGVIRRTTRHG-EDSKLVYFTLACNRQGKAQYSSKN---SFKPNPSTRMQCPAKINFSRR-EEKFCITSITLDHNHPISP 104
                       6***************999998.6666999*************9999...999******************.9**************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MMLQPKKGMT FDSEDAVVNF YKDYAKKEGF GVIRRTTRHG EDSKLVYFTL ACNRQGKAQY  60
SSKNSFKPNP STRMQCPAKI NFSRREEKFC ITSITLDHNH PISPSKARFL RCHKKLDLHA  120
KRRLELNDQA GIRLNKKFGS LVMEAGGYVN LEFGEKECRN YLQETRRLKL GAGDAHAVYQ  180
YFLRMQSKDP DFFHLMDVDK AWVEMINKYD LHENEWLAGL YDEKNRWVPA YVKDTFWAGM  240
SSTKRSESVN AFFDGYVHAR TTLKQFVEQY ENALRDKVEK ETKADSKSFQ EEIPCITHFD  300
FEKQFQAAYT NAKFQEFQEQ L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-31FAR1 family protein