PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 127aa    MW: 14713.8 Da    PI: 4.9253
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1291.7e-40501241993
             NF-YB  19 kvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                       + l  ++ki+kdaketvqecv efisf+tseas+kcqrek ktingddllwa+atlGfe+y+eplkvyl+kyre 
  TRIDC1BG061380.1  50 QELAVDGKIAKDAKETVQECVYEFISFITSEASEKCQREKSKTINGDDLLWAMATLGFEEYIEPLKVYLQKYREW 124
                       678899*******************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
XXXXXXXXXX XXXXXXXXXT CDHLPSLGFR PAWSSDSALG HHGRSDRAQQ ELAVDGKIAK  60
DAKETVQECV YEFISFITSE ASEKCQREKS KTINGDDLLW AMATLGFEEY IEPLKVYLQK  120
YREWQYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.13e-42NF-YB family protein