PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 203aa    MW: 21937.3 Da    PI: 4.583
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-0821432346
                      -HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                      +W+ Ia++++ gRt++++k++w++
  TRIDC1BG061600.1 21 RWSHIASHLP-GRTDNEIKNFWNS 43
                      6*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
NDRVSGKIWD NMLMCVLCAC RWSHIASHLP GRTDNEIKNF WNSCIKKKLR QQGIDPATHK  60
PMGATATAAL PDAKEEDRKT LSAAVNGSLA PKQQTVFAPF PVCADYGGGF AEDLSAGDAT  120
ALYGQFGGAK EGADDDAGFG AGDYSCVLDV SENLGYRESS SNTNNWNYGG SVLDGEVLHW  180
AKAEMEQQHD EPLEQKFSLP CTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-20MYB family protein