PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061600.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 256aa    MW: 28337.7 Da    PI: 6.7806
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061600.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.31.1e-151865148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l+  + ++G g+W++++r  g++R++k+c++rw++yl
  TRIDC1BG061600.2 18 KGLWSPEEDEKLYGHIIRYGVGCWSSVPRLAGLHRCGKSCRLRWLNYL 65
                      678*******************************************97 PP
2Myb_DNA-binding52.71e-1671114146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg +++eE++ +v +++ lG++ W+ Ia++++ gRt++++k++w++
  TRIDC1BG061600.2  71 RGTFSQEEEDHIVALHQILGNR-WSHIASHLP-GRTDNEIKNFWNS 114
                       899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MGRPTSGGVQ QQQPKLRKGL WSPEEDEKLY GHIIRYGVGC WSSVPRLAGL HRCGKSCRLR  60
WLNYLRPDLK RGTFSQEEED HIVALHQILG NRWSHIASHL PGRTDNEIKN FWNSCIKKKL  120
RQQGIDPATH KPMGATATAA LPDAKEEDRK TLSAAVNGSL APKQQTVFAP FPVCADYGGG  180
FAEDLSAGDA GFGAGDYSCV LDVSENLGYR ESSSNTNNWN YGGSVLDGEV LHWAKAEMEQ  240
QHDEPLEQKF SLPCTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.13e-69MYB family protein