PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG061600.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 91aa MW: 10440 Da PI: 9.7063

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG061600.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+ + ++G g+W++++r g++R++k+c++rw++yl TRIDC1BG061600.3 18 KGLWSPEEDEKLYGHIIRYGVGCWSSVPRLAGLHRCGKSCRLRWLNYL 65 678********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 91 aa Download sequence
MGRPTSGGVQ QQQPKLRKGL WSPEEDEKLY GHIIRYGVGC WSSVPRLAGL HRCGKSCRLR 60 WLNYLRPDLK RGTFSQEEED HIVALHQILG N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G57560.1	7e-42	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG061600.3