PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG062300.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 247aa    MW: 26929 Da    PI: 8.6975
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG062300.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-20125174255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp+    r  r++lg+f+tae+Aa+a+++a+ +++g
  TRIDC1BG062300.2 125 QYRGVRQRP-WGKWAAEIRDPR----RaVRVWLGTFDTAEDAARAYDRAAVEFRG 174
                       6********.**********82....48***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
QTFSVSASME ESRQFMIRFD GHFEEDPSSA AAEPPLPFAG RVFSPEQEQS VTVAALLHVI  60
SGYTTPAPEF FFPASKQACT ACGMDGCLGC EFFGAVATGA IAASDAPRAA TARGPQRRRR  120
NKKNQYRGVR QRPWGKWAAE IRDPRRAVRV WLGTFDTAED AARAYDRAAV EFRGPRAKLN  180
FSFPEQQQQL GGSGNAAPAK SDACSPSPSP RSADEEEFIS RMGHQDGNGP CTRKRKQGTC  240
SGTAWWT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1232237TRKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.17e-26ERF family protein