PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG064140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 220aa    MW: 23718.9 Da    PI: 9.6559
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG064140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.83.7e-161462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      rg+W++eEde+l  +v+  G g +W + +++ g++R++k+c++rw++yl
  TRIDC1BG064140.1 14 RGPWSPEEDEQLRAYVRANGFGgNWIALPHKAGLNRCGKSCRLRWLNYL 62
                      89*********************************************97 PP
2Myb_DNA-binding35.72e-1171111446
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        T++Ed  +  + +  G++ W+ Ia++++ gRt++++k++w++
  TRIDC1BG064140.1  71 YTEQEDRVICSLYASIGSR-WSIIASKLP-GRTDNDVKNYWNT 111
                       69*****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGRAPCCDKA RVKRGPWSPE EDEQLRAYVR ANGFGGNWIA LPHKAGLNRC GKSCRLRWLN  60
YLRPDIRHGG YTEQEDRVIC SLYASIGSRW SIIASKLPGR TDNDVKNYWN TKLKKKAMPM  120
RGPHYHHHAG LGLEAGAGAF SAPATPSGPT PARSWSQCVP SSLQAAALSP AASGSSSVDT  180
SSSGGDMCFA AAGMYQPQHP MQGFVHVDSS PQTVLAPMPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.18e-69MYB family protein