PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG065070.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 262aa MW: 28204.3 Da PI: 4.6893

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG065070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.4	1.6e-14	6	43	5	42
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +C+C+k++Cl++YC Cf+a ++C+e C+C++C+N+e++ TRIDC1BG065070.1 6 HCTCEKTQCLQRYCHCFEASVFCDEGCSCQGCRNTEDN 43 8*********************************9975 PP
2	TCR	48.9	1.3e-15	85	122	2	39
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 + kgCnC++s+C+k+YCeCf++g+ Cs++C+C++C N+ TRIDC1BG065070.1 85 HVKGCNCRNSECKKLYCECFKHGVGCSDKCQCTGCGNT 122 689**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MDDLPHCTCE KTQCLQRYCH CFEASVFCDE GCSCQGCRNT EDNSDEVDER AECIMKKKPD 60 AFKPKIIAGD GPGLQQQQQQ AAGVHVKGCN CRNSECKKLY CECFKHGVGC SDKCQCTGCG 120 NTFGVKGAAQ QAHSDSPEGT SGGSGETLAR SNGSSAIIND YMASQLTEIR IMDDIHIPGK 180 LSHMDVDLGP PTQDLGDGGL EDIIFYSYFQ QIIDPQAHQG LAQQADASLS NDTNSLLEQG 240 PSKTDTCDLL HHGSQINKLG GI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04850.1	2e-31	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG065070.1