PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG068900.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 137aa MW: 15167.2 Da PI: 11.4461

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG068900.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.8e-17	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ l+d+v+ G g W++ ar g++Rt+k+c++rw++yl TRIDC1BG068900.2 21 KGPWTMEEDLVLADYVAANGEGAWNSLARAAGLNRTGKSCRLRWLNYL 68 79*********************************************7 PP
2	Myb_DNA-binding	57.7	2.7e-18	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+v++ +++G++ W++Iar+++ gRt++++k++w++ TRIDC1BG068900.2 74 RGNITPEEHLLIVELQARWGNR-WSKIARHLP-GRTDNEIKNFWRT 117 8999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence
RRRTMQCAAG GGGGGEPAVR KGPWTMEEDL VLADYVAANG EGAWNSLARA AGLNRTGKSC 60 RLRWLNYLRP DVRRGNITPE EHLLIVELQA RWGNRWSKIA RHLPGRTDNE IKNFWRTKIQ 120 KKRSAGATAA TAPGASF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40350.1	4e-65	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG068900.2