PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG068900.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 85aa    MW: 9912.44 Da    PI: 11.9117
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG068900.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.28.9e-192669146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg+ T+eE++l+v++ +++G++ W++Iar+++ gRt++++k++w++
  TRIDC1BG068900.3 26 RGNITPEEHLLIVELQARWGNR-WSKIARHLP-GRTDNEIKNFWRT 69
                      8999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MYAGLNRTGK SCRLRWLNYL RPDVRRGNIT PEEHLLIVEL QARWGNRWSK IARHLPGRTD  60
NEIKNFWRTK IQKKRSAGAT AATAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27810.15e-45MYB family protein