PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG069490.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 207aa MW: 22502.8 Da PI: 8.8786

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG069490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	165.5	7.1e-52	73	164	2	93
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 +eq+rflPian++rim++ +P+n+ki+kdake++qecvsefisf+tseasdkc +ekrktingddl+w+++tlGfedyveplk+ylk yre+ TRIDC1BG069490.1 73 KEQERFLPIANIGRIMRRGVPENGKIAKDAKESIQECVSEFISFITSEASDKCMKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLKLYREV 164 89****************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
GSGAFPSSVP VSRGAQRPPS TNFSSRSGGR PRPPPAPTNG ADPLRHLRPS PTKLGAGPAM 60 SEAVGTPESG GAKEQERFLP IANIGRIMRR GVPENGKIAK DAKESIQECV SEFISFITSE 120 ASDKCMKEKR KTINGDDLIW SMGTLGFEDY VEPLKLYLKL YREVIFIHSF VPLFLCCLCY 180 ACAACERNSE FGVRRRFGGY SIGVGEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	2e-54	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG069490.1