PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG071950.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 357aa MW: 40419.9 Da PI: 8.294

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG071950.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.5	1.8e-12	72	152	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn Y+ e GF +r ks+ + ++ +++ vC ++gk+ e+++ + r++C a +++ + +d+ w++++ + HnH+l+p TRIDC1BG071950.2 72 DFYNLYSWEKGFGTRYGKSRLN-VERVKCMQEIVCGCSGKAGVENTR---------SCRCECPALIRLLRAEDNGWYIAEHRDTHNHSLSP 152 6***************9998.55567889999999886555.........99****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
GLSCYHRVGA SRSYMQCDCR LRIGAAAPSR PPCPNHVSAF ERVVRNYVEN PRDNVVTPTI 60 GMTFDSVGEA YDFYNLYSWE KGFGTRYGKS RLNVERVKCM QEIVCGCSGK AGVENTRSCR 120 CECPALIRLL RAEDNGWYIA EHRDTHNHSL SPNFGETLHW PSHKHIGVYT RDLVKQLRQN 180 NVNLAKVYNI IGGFLGSMEN VPFTKRSLRS LCGRINRDHA EDDVKKTMDV FAEIGAKDPH 240 FPYRVQADSD GRIRNLMWAS GNSRLQYSFF GDVITFDTTY RTNLYDMPFG LFVGVNNHFQ 300 SVILAGVLVH DETEDSFVWV FSEFLRMMGG SAPNCAMELA INKGKPLMRA NLAVERA

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

GLSCYHRVGA SRSYMQCDCR LRIGAAAPSR PPCPNHVSAF ERVVRNYVEN PRDNVVTPTI  60
GMTFDSVGEA YDFYNLYSWE KGFGTRYGKS RLNVERVKCM QEIVCGCSGK AGVENTRSCR  120
CECPALIRLL RAEDNGWYIA EHRDTHNHSL SPNFGETLHW PSHKHIGVYT RDLVKQLRQN  180
NVNLAKVYNI IGGFLGSMEN VPFTKRSLRS LCGRINRDHA EDDVKKTMDV FAEIGAKDPH  240
FPYRVQADSD GRIRNLMWAS GNSRLQYSFF GDVITFDTTY RTNLYDMPFG LFVGVNNHFQ  300
SVILAGVLVH DETEDSFVWV FSEFLRMMGG SAPNCAMELA INKGKPLMRA NLAVERA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	2e-36	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG071950.2