PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG071950.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 269aa    MW: 29785.7 Da    PI: 7.236
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG071950.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.31.1e-12145225191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn Y+ e GF +r  ks+ +  ++   +++ vC ++gk+  e+++         + r++C a +++ + +d+ w++++ +  HnH+l+p
  TRIDC1BG071950.3 145 DFYNLYSWEKGFGTRYGKSRLN-VERVKCMQEIVCGCSGKAGVENTR---------SCRCECPALIRLLRAEDNGWYIAEHRDTHNHSLSP 225
                       6*****************9998.5556788999****9999886555.........99******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
IRGSTFLEEV GESLVPDPVV AGAVDAEMVL QHSLVAPETE GHQLRVEVQP AATGEGQILM  60
RSAAAEDMRD VSPPSSELST GKMNPRAPGW NKRLRIGAAA PSRPPCPNHV SAFERVVRNY  120
VENPRDNVVT PTIGMTFDSV GEAYDFYNLY SWEKGFGTRY GKSRLNVERV KCMQEIVCGC  180
SGKAGVENTR SCRCECPALI RLLRAEDNGW YIAEHRDTHN HSLSPNFGET LHWPSHKHIG  240
VYTRDLVKQL RQNNVNLAKV YNIIGGFLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-10FAR1 family protein