PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG072200.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 179aa MW: 18277.8 Da PI: 9.3269

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG072200.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	22.2	2.9e-07	31	68	4	39
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkC..edCkNk 39 + C+C+ s C C Cf +++ Cs++C+C + C N+ TRIDC1BG072200.1 31 NWCSCRTSGCRIHRCPCFMHNAWCSSKCNCaaTVCVNR 68 67****************************66668886 PP
2	TCR	27.2	7.8e-09	110	146	4	40
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 kgC+C skC +k C C ++g+ C+ +C+C++C+N + TRIDC1BG072200.1 110 KGCTCVLSKCTNKKCGCLNRGARCTLKCSCQGCENGK 146 89*********************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
AAQPQPKPLP AQEPESKGEA RNNSPSAVKM NWCSCRTSGC RIHRCPCFMH NAWCSSKCNC 60 AATVCVNRSG AKGALAEKLQ HRGIKREVLA SGSVTSTATA GAVLANEGGK GCTCVLSKCT 120 NKKCGCLNRG ARCTLKCSCQ GCENGKGTGG ADKSNAGAGG TGGTSDTRGS GPNKQIRIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04850.1	1e-09	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG072200.1