PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG074690.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 310aa    MW: 33471.3 Da    PI: 4.393
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG074690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021286307323
                       ETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                       C+ C+k+F++   L +H +  H
  TRIDC1BG074690.1 286 CKSCSKTFNSEGALASHSKAkH 307
                       *****************88766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MEFWGLEVKP NQSVKVSPDD DHFLHLSQGA LGEVKKDDKA TMFVKIGDQK LAIGTLSTDK  60
FPQIQFDLVF EKEFELSHNS KTSSVFFSGY KVFQPAEGDE MDFDSEDDSE EEEEKIIPAL  120
TKENGKPEAK EQKKQVKIDT AAPSKSKAAA KDVGKSKKDD DSDDDDDSDE DDSEDDSGDD  180
GALIPMEDDS DDSEDGDDSS DDSEDSSDEE EEETPKKQET GKKRVAGSVL KTPVTDKKAK  240
IATPSGQKTG DKKGAVHVAT PHPAKKAGKT PATSEKSPKS GGSVACKSCS KTFNSEGALA  300
SHSKAKHEAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.28e-28C2H2 family protein