PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG074690.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 310aa MW: 33367.2 Da PI: 4.3903

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG074690.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00021	286	307	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C+ C+k+F++ L +H + H TRIDC1BG074690.3 286 CKSCSKTFNSEGALASHSKAkH 307 *****************88766 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MDGWGLEVKP NQSVKVSPDD DHFLHLSQGA LGEVKKDDKA TMFVKIGDQK LAIGTLSTDK 60 FPQIQFDLVF EKEFELSHNS KTSSVFFSGY KVFQPAEGDE MDFDSEDDSE EEEEKIIPAL 120 TKENGKPEAK EQKKQVKIDT AAPSKSKAAA KDVGKSKKDD DSDDDDDSDE DDSEDDSGDD 180 GALIPMEDDS DDSEDGDDSS DDSEDSSDEE EEETPKKQET GKKRVAGSVL KTPVTDKKAK 240 IATPSGQKTG DKKGAVHVAT PHPAKKAGKT PATSEKSPKS GGSVACKSCS KTFNSEGALA 300 SHSKAKHEAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44750.2	7e-26	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG074690.3