PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG005830.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 372aa MW: 41132.7 Da PI: 4.4531

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG005830.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	55.4	2e-17	1	110	11	128
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 deelv ++L+++ ++++l++ +v+ +d+ ++P+d + wy + d + y +g+ r++k gyWk + + ++++ g+ TRIDC2AG005830.1 1 DEELV-RFLAERKADDSLPE-NVLVGMDLSLIHPQDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAGV 84 89*.89999999999999.89*********85.....4577887665541457799*********99875544.4.5789* PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 k +L fy+g+ap+g++t+W+mhey++ TRIDC2AG005830.1 85 KFSLEFYEGEAPSGKRTQWLMHEYQV 110 ************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
DEELVRFLAE RKADDSLPEN VLVGMDLSLI HPQDSSPGNI WYLNQSDDQQ PYGNGESDIR 60 KAKGGYWKCI DVLRIPTSKS TAGVKFSLEF YEGEAPSGKR TQWLMHEYQV EQNDEANVPQ 120 EYKSLCTILM QGSKKLDTED ELLSLSTNAP NDHLESYLQY LADMEEQNVA VNSKIVSSSQ 180 QNSSSREGKD IYEDYNAADG VDFVNALANE DYIEMKDLLS SDGSASTSEF SSRRSEEYFD 240 SDALLRELLN DQNTTREIHQ DCNHNIAGPT KSDCVVISPP EQGLVHNHDN GAMVAGTSLE 300 KAASDSERDQ HSSDQCLDHH PPASSCSQNS HVEQSHSNSS SSSHGSTTSP QRSRSIGKLG 360 KIGKKYCCLG SF

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

DEELVRFLAE RKADDSLPEN VLVGMDLSLI HPQDSSPGNI WYLNQSDDQQ PYGNGESDIR  60
KAKGGYWKCI DVLRIPTSKS TAGVKFSLEF YEGEAPSGKR TQWLMHEYQV EQNDEANVPQ  120
EYKSLCTILM QGSKKLDTED ELLSLSTNAP NDHLESYLQY LADMEEQNVA VNSKIVSSSQ  180
QNSSSREGKD IYEDYNAADG VDFVNALANE DYIEMKDLLS SDGSASTSEF SSRRSEEYFD  240
SDALLRELLN DQNTTREIHQ DCNHNIAGPT KSDCVVISPP EQGLVHNHDN GAMVAGTSLE  300
KAASDSERDQ HSSDQCLDHH PPASSCSQNS HVEQSHSNSS SSSHGSTTSP QRSRSIGKLG  360
KIGKKYCCLG SF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	2e-15	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG005830.1