PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG006940.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 387aa MW: 43311.5 Da PI: 6.6273

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG006940.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.9	2.9e-51	13	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 l+pGfrFhPtdeelv++yLkkk+++k++++ e i+++diyk++PwdLpk + +++e+e yf+++rd+ky+++ r+nr+t++g+Wkatg+d+++ TRIDC2AG006940.1 13 LMPGFRFHPTDEELVSFYLKKKIQQKPISI-ELIRQLDIYKFDPWDLPKlASTGSETESYFYCPRDRKYRNSARPNRVTAAGFWKATGTDRPI 104 689*************************.89***********52445577799******************************** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ +++ vglkk+Lvfykgra +g+ktdW+mhe+rl TRIDC2AG006940.1 105 YSSeDTRCVGLKKSLVFYKGRAARGVKTDWMMHEFRL 141 9866777**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MESRSDVKSD EILMPGFRFH PTDEELVSFY LKKKIQQKPI SIELIRQLDI YKFDPWDLPK 60 LASTGSETES YFYCPRDRKY RNSARPNRVT AAGFWKATGT DRPIYSSEDT RCVGLKKSLV 120 FYKGRAARGV KTDWMMHEFR LPSLADTSLP KSRPIDKNIP LNDSWTICRI FKKTSSMAAQ 180 RALSHTWGAP LPGATEQDIF SALQPVQALH FASESSSSSL QVAATLPSNQ FNGNYGFQGQ 240 HQQFQKPSNT QEDGSSCRVI SFNSDPSLQV LKGPIILPFQ TQPPSQKPGH AAPPLFFDMQ 300 FGQPEQTTGF VTGSSADVNA DMSCRDQESA TTKHGNTFSM NSEREDAGLG RLNFPFDLGA 360 DSSDDWECNI PWESFLSPTV PAEITQY

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MESRSDVKSD EILMPGFRFH PTDEELVSFY LKKKIQQKPI SIELIRQLDI YKFDPWDLPK  60
LASTGSETES YFYCPRDRKY RNSARPNRVT AAGFWKATGT DRPIYSSEDT RCVGLKKSLV  120
FYKGRAARGV KTDWMMHEFR LPSLADTSLP KSRPIDKNIP LNDSWTICRI FKKTSSMAAQ  180
RALSHTWGAP LPGATEQDIF SALQPVQALH FASESSSSSL QVAATLPSNQ FNGNYGFQGQ  240
HQQFQKPSNT QEDGSSCRVI SFNSDPSLQV LKGPIILPFQ TQPPSQKPGH AAPPLFFDMQ  300
FGQPEQTTGF VTGSSADVNA DMSCRDQESA TTKHGNTFSM NSEREDAGLG RLNFPFDLGA  360
DSSDDWECNI PWESFLSPTV PAEITQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	7e-96	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG006940.1