PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG008830.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 237aa    MW: 26538.4 Da    PI: 9.5502
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG008830.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.6e-09185233146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 
                       r++WT+  +  l+d+v ++G+g+Wk I    +   + R+  + k+++++
  TRIDC2AG008830.1 185 RKKWTEIQERTLIDGVDKYGKGNWKDIKIAYPdvfQDRSTVDMKDKFRN 233
                       789*******************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
LDTWANADQD TRKKLRRLVG ESTAREILGK LGQDPSKAPQ VDEAANAPST SGANEGDRAQ  60
QDDEAHLGRG KGEASLAQED CARHQQEPVE RTTDARIPEK PVTSAATKGK EQATSSHVTG  120
QAAPDHNKSH PVTGPKPSLM ERKPSAIVYQ WDSGDSDSER PPHQRRLPNY ERRMRPPPAV  180
PYKTRKKWTE IQERTLIDGV DKYGKGNWKD IKIAYPDVFQ DRSTVDMKDK FRNMGRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.11e-10MYB_related family protein