PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG009000.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 273aa MW: 29634.2 Da PI: 5.0593

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG009000.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.2	8.1e-05	44	89	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + erE+ Rd +N+ f+eL e+l + + + Ka iL+ +++ +++L TRIDC2AG009000.1 44 KAEREKHKRDLLNDLFSELDEMLEAD----RQTNGKACILTDTTRILRDL 89 579********************997....57788888998888887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MVAMLPAARG DAAPAASAGA ADKLVHGPVT DGKCKKKAPR MIHKAEREKH KRDLLNDLFS 60 ELDEMLEADR QTNGKACILT DTTRILRDLL SQLESLRKEN STLQNESHYV TMERNELQDE 120 NGVLRNEILE LQNELATLPA GNPGWGHATA GSPHPAGTVF PSQQPMQPTT IASAVFPLQQ 180 PLQQTTILEH PYAPPPPPRE LKLFPDAASD IEGLEPSEDQ EAANHIARPL ARYPTQSALW 240 PVSLGLPRME DEQCSSGTTG SSKEGSSSAS SRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	3e-23	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG009000.1