PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG009000.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 249aa    MW: 27575.9 Da    PI: 5.2002
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG009000.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.47e-052065554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      + erE+  Rd +N+ f+eL e+l  +     + + Ka iL+ +++ +++L
  TRIDC2AG009000.2 20 KAEREKHKRDLLNDLFSELDEMLEAD----RQTNGKACILTDTTRILRDL 65
                      579********************997....57788888998888887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MRRPVTDGKC KKKAPRMIHK AEREKHKRDL LNDLFSELDE MLEADRQTNG KACILTDTTR  60
ILRDLLSQLE SLRKENSTLQ NESHYVTMER NELQDENGVL RNEILELQNE LATLPAGNPG  120
WGHATAGSPH PAGTVFPSQQ PMQPTTIASA VFPLQQPLQQ TTILEHPYAP PPPPRELKLF  180
PDAASDIEGL EPSEDQEAAN HIARPLARYP TQSALWPVSL GLPRMEDEQC SSGTTGSSKE  240
GSSSASSRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.22e-23bHLH family protein