PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG009000.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 236aa MW: 26103.1 Da PI: 4.8973

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG009000.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11	0.0008	9	38	5	40
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STC CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsK 40 + erE+ Rd +N+ f+eL e+l + +++ K TRIDC2AG009000.3 9 KAEREKHKRDLLNDLFSELDEMLDRQ---TNG---K 38 579*******************9776...333...3 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
KKAPRMIHKA EREKHKRDLL NDLFSELDEM LDRQTNGKAC ILTDTTRILR DLLSQLESLR 60 KENSTLQNES HYVTMERNEL QDENGVLRNE ILELQNELAT LPAGNPGWGH ATAGSPHPAG 120 TVFPSQQPMQ PTTIASAVFP LQQPLQQTTI LEHPYAPPPP PRELKLFPDA ASDIEGLEPS 180 EDQEAANHIA RPLARYPTQS ALWPVSLGLP RMEDEQCSSG TTGSSKEGSS SASSRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	1e-19	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG009000.3