PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG010200.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 413aa MW: 45585.1 Da PI: 4.7494

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG010200.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112	4.2e-35	43	133	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sws+ +nsfvv+d++ fa+ +Lp++Fkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+++ll TRIDC2AG010200.1 43 FLTKTYDMVDDPNTDSIMSWSAGNNSFVVWDPHAFATVLLPRHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 126 9**************************************************************999.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++i+r+k TRIDC2AG010200.1 127 KNIRRRK 133 ***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MDPVPGLVKE EEEEGAHGRG DSPAVGAAPR PMEGLHDAGP PPFLTKTYDM VDDPNTDSIM 60 SWSAGNNSFV VWDPHAFATV LLPRHFKHSN FSSFVRQLNT YGFRKVDPDR WEFANEGFLR 120 GQRHLLKNIR RRKPPAHTAS NQQSLGSYLE VGHFGYDAEI DRLKRDKQLL MAEVVKLRQE 180 QQNTKARLKA MEDRLRGTEQ KQQQMTSFMA RILRNPEFLK QLIAKNGMRK ELHDAISKKR 240 RRRIDGGPEA YAVGASSSSL EQELPVVFDS HGSVELLAEG SVPVELLADG IPPDLEGSVE 300 LLADEIPPGL EGSVALLADG LEGSVELLVD GIPSDLDGSG IDSNGVTEPQ DYGLGTCEAQ 360 QNRAPGLFHD NFWEELLNKG LSVENDEPVN VDGMDVLSEK MGYLIPNSPT LST

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MDPVPGLVKE EEEEGAHGRG DSPAVGAAPR PMEGLHDAGP PPFLTKTYDM VDDPNTDSIM  60
SWSAGNNSFV VWDPHAFATV LLPRHFKHSN FSSFVRQLNT YGFRKVDPDR WEFANEGFLR  120
GQRHLLKNIR RRKPPAHTAS NQQSLGSYLE VGHFGYDAEI DRLKRDKQLL MAEVVKLRQE  180
QQNTKARLKA MEDRLRGTEQ KQQQMTSFMA RILRNPEFLK QLIAKNGMRK ELHDAISKKR  240
RRRIDGGPEA YAVGASSSSL EQELPVVFDS HGSVELLAEG SVPVELLADG IPPDLEGSVE  300
LLADEIPPGL EGSVALLADG LEGSVELLVD GIPSDLDGSG IDSNGVTEPQ DYGLGTCEAQ  360
QNRAPGLFHD NFWEELLNKG LSVENDEPVN VDGMDVLSEK MGYLIPNSPT LST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	243	KKRRRR
2	239	244	KRRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-101	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG010200.1