PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG010200.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 308aa    MW: 34341.7 Da    PI: 7.3495
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG010200.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.72.4e-35531432101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+++++++sws+ +nsfvv+d++ fa+ +Lp++Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+++ll
  TRIDC2AG010200.3  53 FLTKTYDMVDDPNTDSIMSWSAGNNSFVVWDPHAFATVLLPRHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 136
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       ++i+r+k
  TRIDC2AG010200.3 137 KNIRRRK 143
                       *****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
CVGGFLGFGG MDPVPGLVKE EEEEGAHGRG DSPAVGAAPR PMEGLHDAGP PPFLTKTYDM  60
VDDPNTDSIM SWSAGNNSFV VWDPHAFATV LLPRHFKHSN FSSFVRQLNT YGFRKVDPDR  120
WEFANEGFLR GQRHLLKNIR RRKPPAHTAS NQQSLGSYLE VGHFGYDAEI DRLKRDKQLL  180
MAEVVKLRQE QQNTKARLKA MEDRLRGTEQ KQQQMTSFMA RILRNPEFLK QLIAKNGMRK  240
ELHDAISKKR RRRIDGGPEA YAVGASSSSL EQELPVVFDS QGSVELLVDG IPSDLDGSGI  300
DSNGVTEP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1248253KKRRRR
2249254KRRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-102HSF family protein