PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG010310.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 195aa MW: 20659.6 Da PI: 8.9296

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG010310.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.4	5.2e-05	50	72	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F+++ L H +H TRIDC2AG010310.1 50 FRCSVCGKAFPSHQALGGHKASH 72 89*************99998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MMKMTHDDYV HLCLMALASV ATGGGQAEAA KGQWLQTLPA TTAAACELRF RCSVCGKAFP 60 SHQALGGHKA SHRKRAALVL PLQSVSPAEE TVASSTSSGV GGHRCSVCHR SFATGQALGG 120 HKRCHYWDGL SVSLTASASG SGSSARDFDL NLTPVTEKAA AGMRRWGEEE EVQSPLPFKK 180 RRLSSPSLEL NLILL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04340.1	2e-29	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG010310.1