PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG011250.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 233aa    MW: 25593 Da    PI: 8.3828
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG011250.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.42.8e-172875148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd ll+++++  G g+W++ ar+ g++Rt+k+c++rw++yl
  TRIDC2AG011250.1 28 RGPWTVEEDVLLANYIAANGEGRWNALARRAGLKRTGKSCRLRWLNYL 75
                      89********************************************97 PP
2Myb_DNA-binding52.31.3e-1681124146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg +T+eE++l +++++++G++ W++Ia++++ gRt++++k++w++
  TRIDC2AG011250.1  81 RGGMTAEEQLLVLELHARWGNR-WSKIAQHLP-GRTDNEIKNYWRT 124
                       6789******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
LSVVAMACDQ RGMRGEETAA GEEEMLRRGP WTVEEDVLLA NYIAANGEGR WNALARRAGL  60
KRTGKSCRLR WLNYLRPDLR RGGMTAEEQL LVLELHARWG NRWSKIAQHL PGRTDNEIKN  120
YWRTRVQRHA KQLRCDVGSQ RFRDLVRGLW IPRLLERIHA ANSSGEGDVI AQATAAALPV  180
AADGRCWAVD DVFDLGPGAA AADVELSCTT ALSSSSSVST DGCGVQPLPP PAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.12e-76MYB family protein