PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG011900.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 155aa    MW: 17792.6 Da    PI: 10.47
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG011900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.48e-55121421129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdee+v++yL++kv ++++++ +vi++vd++k ePw+Lp k+k +ekew+fF+++ +ky+tg+r+nratk+gyWkatgkdke++
  TRIDC2AG011900.1  12 LPPGFRFHPTDEEVVTHYLTRKVLRESFSC-QVITDVDLNKNEPWELPGKAKMGEKEWFFFVHKGRKYPTGTRTNRATKKGYWKATGKDKEIF 103
                       79****************************.99***************99999**************************************** PP

               NAM  94 sk...kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +    +  lvg+kktLvfy+grap+g kt Wvmheyrle
  TRIDC2AG011900.1 104 RGkgrDAVLVGMKKTLVFYTGRAPSGGKTPWVMHEYRLE 142
                       984444445****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MSDVTAVMDL ALPPGFRFHP TDEEVVTHYL TRKVLRESFS CQVITDVDLN KNEPWELPGK  60
AKMGEKEWFF FVHKGRKYPT GTRTNRATKK GYWKATGKDK EIFRGKGRDA VLVGMKKTLV  120
FYTGRAPSGG KTPWVMHEYR LEGQLPHRLP HTAKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.12e-72NAC family protein