PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG011900.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 352aa MW: 38872.1 Da PI: 5.8903

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG011900.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.2	7.8e-54	12	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdee+v++yL++kv ++++++ +vi++vd++k ePw+Lp k+k +ekew+fF+++ +ky+tg+r+nratk+gyWkatgkdke++ TRIDC2AG011900.2 12 LPPGFRFHPTDEEVVTHYLTRKVLRESFSC-QVITDVDLNKNEPWELPGKAKMGEKEWFFFVHKGRKYPTGTRTNRATKKGYWKATGKDKEIF 103 79**************************.99***********99999************************************ PP NAM 94 sk...kgelvglkktLvfykgrapkgektdWvmheyrle 129 + + lvg+kktLvfy+grap+g kt Wvmheyrle TRIDC2AG011900.2 104 RGkgrDAVLVGMKKTLVFYTGRAPSGGKTPWVMHEYRLE 142 984444445**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MSDVTAVMDL ALPPGFRFHP TDEEVVTHYL TRKVLRESFS CQVITDVDLN KNEPWELPGK 60 AKMGEKEWFF FVHKGRKYPT GTRTNRATKK GYWKATGKDK EIFRGKGRDA VLVGMKKTLV 120 FYTGRAPSGG KTPWVMHEYR LEGQLPHRLP HTAKDDWAVC RVFNKDLAAK NAPPQMAPAA 180 DGAMEDPLAF LDDLLIDTDL FDDADLPMLM DSPSGADDFA GASSSTSSAA LPLEPDGEHL 240 TIKTELPVLH PQQQQSPNYF FIPATANGNL GGAGYSPYQA MGDQQAAIRR YSKPKAEVAS 300 SSALLSPSLG LDTRALAGAD TSFLMPSSRS YLDLEELFRG EALMDYSDMW KI

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MSDVTAVMDL ALPPGFRFHP TDEEVVTHYL TRKVLRESFS CQVITDVDLN KNEPWELPGK  60
AKMGEKEWFF FVHKGRKYPT GTRTNRATKK GYWKATGKDK EIFRGKGRDA VLVGMKKTLV  120
FYTGRAPSGG KTPWVMHEYR LEGQLPHRLP HTAKDDWAVC RVFNKDLAAK NAPPQMAPAA  180
DGAMEDPLAF LDDLLIDTDL FDDADLPMLM DSPSGADDFA GASSSTSSAA LPLEPDGEHL  240
TIKTELPVLH PQQQQSPNYF FIPATANGNL GGAGYSPYQA MGDQQAAIRR YSKPKAEVAS  300
SSALLSPSLG LDTRALAGAD TSFLMPSSRS YLDLEELFRG EALMDYSDMW KI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	5e-79	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG011900.2