PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG011960.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 347aa MW: 38271 Da PI: 5.2646

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG011960.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.1	1.4e-52	19	149	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdee+v++yL++k+ ++ +++ vi++vd++k+ePwdLp k+k +ekewyfF+++d+ky+tg+r+nrat++gyWkatgkdke++ TRIDC2AG011960.2 19 LPPGFRFHPTDEEVVTHYLTPKAVNNAFSC-LVIADVDLNKTEPWDLPGKAKMGEKEWYFFVHKDRKYPTGTRTNRATEKGYWKATGKDKEIF 110 79************************99.78***********99999************************************ PP NAM 94 sk...kgelvglkktLvfykgrapkgektdWvmheyrle 129 + + lvg+kktLvfy+grap+g kt vmheyrle TRIDC2AG011960.2 111 RGkgrDAVLVGMKKTLVFYTGRAPRGDKTPYVMHEYRLE 149 984444445**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MSDVTAVMDL EVEEPRLSLP PGFRFHPTDE EVVTHYLTPK AVNNAFSCLV IADVDLNKTE 60 PWDLPGKAKM GEKEWYFFVH KDRKYPTGTR TNRATEKGYW KATGKDKEIF RGKGRDAVLV 120 GMKKTLVFYT GRAPRGDKTP YVMHEYRLEG QLPHRLPRSA RNDWAVCRVF DKDLAAKNAP 180 PQTASAAVGV MEDPYAFLDV DDFFNNPDLP MLMDSPSGAD DFAGASSSTS SAAVPLEPDM 240 EHLSIKTEPP VPQQQMQSPN YFFMPATTAN GNHGGGAYSP YQAMGEQQSA IRRHCKPEAA 300 SSSALLSPSL GFDTGALAGG DTSFVIPSSR SYLDLEELCR GEPPMDY

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MSDVTAVMDL EVEEPRLSLP PGFRFHPTDE EVVTHYLTPK AVNNAFSCLV IADVDLNKTE  60
PWDLPGKAKM GEKEWYFFVH KDRKYPTGTR TNRATEKGYW KATGKDKEIF RGKGRDAVLV  120
GMKKTLVFYT GRAPRGDKTP YVMHEYRLEG QLPHRLPRSA RNDWAVCRVF DKDLAAKNAP  180
PQTASAAVGV MEDPYAFLDV DDFFNNPDLP MLMDSPSGAD DFAGASSSTS SAAVPLEPDM  240
EHLSIKTEPP VPQQQMQSPN YFFMPATTAN GNHGGGAYSP YQAMGEQQSA IRRHCKPEAA  300
SSSALLSPSL GFDTGALAGG DTSFVIPSSR SYLDLEELCR GEPPMDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	4e-81	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG011960.2